Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.65■□□□□ 0.58
Hdac1O09106 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.65■□□□□ 0.58
Hdac1O09106 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hdac1O09106 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.65■□□□□ 0.58
Hdac1O09106 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hdac1O09106 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hdac1O09106 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hdac1O09106 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.64■□□□□ 0.58
Hdac1O09106 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hdac1O09106 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.64■□□□□ 0.58
Hdac1O09106 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.64■□□□□ 0.58
Hdac1O09106 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Hdac1O09106 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Hdac1O09106 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac1O09106 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac1O09106 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.64■□□□□ 0.57
Hdac1O09106 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac1O09106 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.64■□□□□ 0.57
Hdac1O09106 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac1O09106 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac1O09106 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac1O09106 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac1O09106 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac1O09106 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac1O09106 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac1O09106 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hdac1O09106 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac1O09106 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.64■□□□□ 0.57
Hdac1O09106 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.63■□□□□ 0.57
Hdac1O09106 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Hdac1O09106 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Hdac1O09106 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.63■□□□□ 0.57
Hdac1O09106 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Hdac1O09106 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Hdac1O09106 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac1O09106 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hdac1O09106 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Hdac1O09106 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
Hdac1O09106 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Hdac1O09106 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Gm9013-201ENSMUST00000132939 882 ntBASIC18.62■□□□□ 0.57
Hdac1O09106 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.62■□□□□ 0.57
Hdac1O09106 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac1O09106 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac1O09106 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac1O09106 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.61■□□□□ 0.57
Hdac1O09106 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.61■□□□□ 0.57
Hdac1O09106 Efs-202ENSMUST00000227037 2540 ntBASIC18.61■□□□□ 0.57
Hdac1O09106 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac1O09106 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac1O09106 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac1O09106 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hdac1O09106 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Hdac1O09106 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac1O09106 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.61■□□□□ 0.57
Hdac1O09106 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hdac1O09106 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.61■□□□□ 0.57
Hdac1O09106 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms