Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Gm20760-201ENSMUST00000179197 648 ntBASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa8J3QNX5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa8J3QNX5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa8J3QNX5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms