Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-3J3QMG8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-3J3QMG8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Gm18622-201ENSMUST00000219361 595 ntBASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-3J3QMG8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13d-3J3QMG8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13d-3J3QMG8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms