Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn20G5E8X0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Gm10231-201ENSMUST00000181584 441 ntBASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Gm10175-202ENSMUST00000208752 441 ntBASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Gm7213-201ENSMUST00000215977 950 ntBASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn20G5E8X0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Cldn20G5E8X0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Gm10566-201ENSMUST00000086739 996 ntBASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn20G5E8X0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms