Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Gm16198-201ENSMUST00000118766 670 ntBASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc1G3X9F6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc1G3X9F6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc1G3X9F6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Gm9385-201ENSMUST00000117563 472 ntBASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3tc1G3X9F6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms