Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Nkx1-1G3UXB3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Gm8410-201ENSMUST00000117225 605 ntBASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Gm15693-201ENSMUST00000120470 637 ntBASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx1-1G3UXB3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Gm14719-201ENSMUST00000121891 340 ntBASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Gm34272-201ENSMUST00000208886 253 ntBASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 AC140368.1-202ENSMUST00000226131 658 ntBASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Nkx1-1G3UXB3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx1-1G3UXB3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Gm12138-201ENSMUST00000122180 951 ntBASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Gm25295-201ENSMUST00000122794 306 ntBASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Gm44830-201ENSMUST00000207667 584 ntBASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Gm6180-201ENSMUST00000065243 498 ntBASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx1-1G3UXB3 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.96■□□□□ 0.46
Nkx1-1G3UXB3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms