Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.13□□□□□ -0.15
Pcdh1F7BJK1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Gm43799-201ENSMUST00000201845 579 ntBASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Gm18959-201ENSMUST00000208954 655 ntBASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh1F7BJK1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Gm15565-201ENSMUST00000118890 427 ntBASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Gm10052-201ENSMUST00000168019 960 ntBASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Mir5130-201ENSMUST00000175160 84 ntBASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Gm7729-201ENSMUST00000050143 801 ntBASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh1F7BJK1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh1F7BJK1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms