Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdh17E9PXF0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Gm14140-201ENSMUST00000119999 995 ntBASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Gm15467-201ENSMUST00000120582 445 ntBASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh17E9PXF0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh17E9PXF0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh17E9PXF0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms