Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gm28043E0CXC2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm28043E0CXC2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 AA414768-201ENSMUST00000121924 1257 ntBASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Gm28043E0CXC2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Mir770-201ENSMUST00000103252 94 ntBASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28043E0CXC2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28043E0CXC2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms