Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim30cD3YVI9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim30cD3YVI9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim30cD3YVI9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim30cD3YVI9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.13■□□□□ 0.33
Trim30cD3YVI9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Gm27742-201ENSMUST00000184667 60 ntBASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim30cD3YVI9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Ank2-226ENSMUST00000189368 339 ntBASIC17.12■□□□□ 0.33
Trim30cD3YVI9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms