Protein–RNA interactions for Protein: B2RV38

Rd3l, BC048943 protein, mousemouse

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3lB2RV38 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.7□□□□□ -0.22
Rd3lB2RV38 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.7□□□□□ -0.22
Rd3lB2RV38 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.7□□□□□ -0.22
Rd3lB2RV38 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.7□□□□□ -0.22
Rd3lB2RV38 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3lB2RV38 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.69□□□□□ -0.22
Rd3lB2RV38 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Gm18421-201ENSMUST00000204122 625 ntBASIC13.69□□□□□ -0.22
Rd3lB2RV38 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Gm18115-201ENSMUST00000221209 621 ntBASIC13.69□□□□□ -0.22
Rd3lB2RV38 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.69□□□□□ -0.22
Rd3lB2RV38 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3lB2RV38 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Gm44450-201ENSMUST00000199528 114 ntBASIC13.68□□□□□ -0.22
Rd3lB2RV38 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Rd3lB2RV38 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3lB2RV38 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3lB2RV38 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3lB2RV38 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3lB2RV38 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3lB2RV38 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3lB2RV38 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3lB2RV38 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3lB2RV38 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3lB2RV38 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.67□□□□□ -0.22
Rd3lB2RV38 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rd3lB2RV38 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Rd3lB2RV38 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms