Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.32■□□□□ 0.04
Chd3B1AR17 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.32■□□□□ 0.04
Chd3B1AR17 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.32■□□□□ 0.04
Chd3B1AR17 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Chd3B1AR17 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.32■□□□□ 0.04
Chd3B1AR17 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Chd3B1AR17 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Chd3B1AR17 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Mir3113-201ENSMUST00000175478 76 ntBASIC15.32■□□□□ 0.04
Chd3B1AR17 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.32■□□□□ 0.04
Chd3B1AR17 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd3B1AR17 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chd3B1AR17 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.31■□□□□ 0.04
Chd3B1AR17 Gm37153-201ENSMUST00000193637 231 ntBASIC15.31■□□□□ 0.04
Chd3B1AR17 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Chd3B1AR17 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.31■□□□□ 0.04
Chd3B1AR17 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chd3B1AR17 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.31■□□□□ 0.04
Chd3B1AR17 Gm7787-201ENSMUST00000216858 688 ntBASIC15.31■□□□□ 0.04
Chd3B1AR17 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd3B1AR17 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd3B1AR17 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.3■□□□□ 0.04
Chd3B1AR17 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd3B1AR17 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chd3B1AR17 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chd3B1AR17 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd3B1AR17 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.3■□□□□ 0.04
Chd3B1AR17 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.3■□□□□ 0.04
Chd3B1AR17 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd3B1AR17 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd3B1AR17 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd3B1AR17 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Chd3B1AR17 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd3B1AR17 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd3B1AR17 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd3B1AR17 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd3B1AR17 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd3B1AR17 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.3■□□□□ 0.04
Chd3B1AR17 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd3B1AR17 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chd3B1AR17 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Chd3B1AR17 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Gm2756-201ENSMUST00000195851 400 ntBASIC15.29■□□□□ 0.04
Chd3B1AR17 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Chd3B1AR17 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Chd3B1AR17 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chd3B1AR17 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd3B1AR17 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.29■□□□□ 0.04
Chd3B1AR17 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.29■□□□□ 0.04
Chd3B1AR17 Gm8000-201ENSMUST00000188378 592 ntBASIC15.29■□□□□ 0.04
Chd3B1AR17 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.29■□□□□ 0.04
Chd3B1AR17 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd3B1AR17 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Chd3B1AR17 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms