Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d4bA6X942 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d4bA6X942 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh2d4bA6X942 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh2d4bA6X942 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh2d4bA6X942 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh2d4bA6X942 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh2d4bA6X942 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh2d4bA6X942 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh2d4bA6X942 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Gm8097-201ENSMUST00000117903 829 ntBASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d4bA6X942 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d4bA6X942 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Sh2d4bA6X942 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d4bA6X942 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d4bA6X942 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d4bA6X942 Gm14057-201ENSMUST00000120631 482 ntBASIC16.75■□□□□ 0.27
Sh2d4bA6X942 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d4bA6X942 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d4bA6X942 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.75■□□□□ 0.27
Sh2d4bA6X942 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d4bA6X942 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d4bA6X942 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d4bA6X942 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Gm11780-201ENSMUST00000136880 516 ntBASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Gm25911-201ENSMUST00000157621 56 ntBASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Gm10175-201ENSMUST00000086013 645 ntBASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d4bA6X942 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d4bA6X942 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms