Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.19□□□□□ -0.3
Col6a4A2AX52 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.19□□□□□ -0.3
Col6a4A2AX52 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.19□□□□□ -0.3
Col6a4A2AX52 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.19□□□□□ -0.3
Col6a4A2AX52 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.18□□□□□ -0.3
Col6a4A2AX52 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.18□□□□□ -0.3
Col6a4A2AX52 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Gm43125-201ENSMUST00000201724 730 ntBASIC13.18□□□□□ -0.3
Col6a4A2AX52 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.18□□□□□ -0.3
Col6a4A2AX52 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.18□□□□□ -0.3
Col6a4A2AX52 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Col6a4A2AX52 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Gm27306-201ENSMUST00000183970 107 ntBASIC13.17□□□□□ -0.3
Col6a4A2AX52 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Gm2423-201ENSMUST00000074863 733 ntBASIC13.17□□□□□ -0.3
Col6a4A2AX52 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a4A2AX52 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms