Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc112A0AUP1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Gm10231-201ENSMUST00000181584 441 ntBASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Gm10175-202ENSMUST00000208752 441 ntBASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc112A0AUP1 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc112A0AUP1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.46
Ccdc112A0AUP1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc112A0AUP1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc112A0AUP1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ccdc112A0AUP1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc112A0AUP1 Gm11950-201ENSMUST00000121615 838 ntBASIC17.89■□□□□ 0.45
Ccdc112A0AUP1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc112A0AUP1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc112A0AUP1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ccdc112A0AUP1 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.89■□□□□ 0.45
Ccdc112A0AUP1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc112A0AUP1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc112A0AUP1 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.89■□□□□ 0.45
Ccdc112A0AUP1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc112A0AUP1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc112A0AUP1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms