Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn2aA0A0J9YTW6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm27646-201ENSMUST00000183989 110 ntBASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm8655-201ENSMUST00000221159 852 ntBASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Scn2aA0A0J9YTW6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm15173-201ENSMUST00000122049 433 ntBASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Mir5131-201ENSMUST00000175426 93 ntBASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm12350-201ENSMUST00000121208 462 ntBASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2aA0A0J9YTW6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms