Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm5643-201ENSMUST00000117081 966 ntBASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9d-4A0A0G2JG37 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm20760-201ENSMUST00000179197 648 ntBASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Slc35b2-202ENSMUST00000223987 1766 ntBASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9d-4A0A0G2JG37 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm12527-201ENSMUST00000117967 564 ntBASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm38027-201ENSMUST00000192315 235 ntBASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 AC159205.3-201ENSMUST00000224614 874 ntBASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms