Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv4-53A0A0G2JFC6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Gm29518-201ENSMUST00000190858 372 ntBASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.09□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Igkv4-53A0A0G2JFC6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv4-53A0A0G2JFC6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms