Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav13-1A0A075B644 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-1A0A075B644 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-1A0A075B644 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav13-1A0A075B644 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Trav13-1A0A075B644 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav13-1A0A075B644 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Trav13-1A0A075B644 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav13-1A0A075B644 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms