Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Gm11336-201ENSMUST00000118168 334 ntBASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Trmt13-210ENSMUST00000198454 880 ntBASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Odf3b-204ENSMUST00000227834 930 ntBASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-2A0A075B638 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Gm6257-201ENSMUST00000163864 910 ntBASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4-2A0A075B638 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms