Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8n-2A0A075B633 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Gm13365-201ENSMUST00000121188 973 ntBASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Gm18246-201ENSMUST00000221023 728 ntBASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav8n-2A0A075B633 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8n-2A0A075B633 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Gm11745-201ENSMUST00000121669 448 ntBASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav8n-2A0A075B633 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trav8n-2A0A075B633 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms