Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm15039-201ENSMUST00000118914 875 ntBASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm10052-201ENSMUST00000168019 960 ntBASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm7729-201ENSMUST00000050143 801 ntBASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms