Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Trav13d-1A0A075B606 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Gm6376-201ENSMUST00000209407 580 ntBASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav13d-1A0A075B606 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Gm18733-201ENSMUST00000173950 856 ntBASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Gm36967-201ENSMUST00000193814 266 ntBASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13d-1A0A075B606 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13d-1A0A075B606 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-1A0A075B606 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms