Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9-1A0A075B601 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav9-1A0A075B601 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9-1A0A075B601 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9-1A0A075B601 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9-1A0A075B601 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9-1A0A075B601 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9-1A0A075B601 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Gm10231-201ENSMUST00000181584 441 ntBASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Gm10175-202ENSMUST00000208752 441 ntBASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-1A0A075B601 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Asic1-205ENSMUST00000228185 1818 ntBASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Gm6345-202ENSMUST00000180900 204 ntBASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-1A0A075B601 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-1A0A075B601 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms