Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Mir5130-201ENSMUST00000175160 84 ntBASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm37722-201ENSMUST00000193757 208 ntBASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-1A0A075B5Z8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm45058-201ENSMUST00000205810 766 ntBASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6-1A0A075B5Z8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6-1A0A075B5Z8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm27389-201ENSMUST00000183622 195 ntBASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav6-1A0A075B5Z8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms