Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav1A0A075B5Z4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav1A0A075B5Z4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Gm15165-201ENSMUST00000118140 502 ntBASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav1A0A075B5Z4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Gm14722-201ENSMUST00000118943 689 ntBASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Gm27704-201ENSMUST00000185094 107 ntBASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav1A0A075B5Z4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav1A0A075B5Z4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms