Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
PdfS4R2K0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PdfS4R2K0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.06□□□□□ -0.48
PdfS4R2K0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.06□□□□□ -0.48
PdfS4R2K0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
PdfS4R2K0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.06□□□□□ -0.48
PdfS4R2K0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PdfS4R2K0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.06□□□□□ -0.48
PdfS4R2K0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.06□□□□□ -0.48
PdfS4R2K0 Gm38027-201ENSMUST00000192315 235 ntBASIC12.06□□□□□ -0.48
PdfS4R2K0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.06□□□□□ -0.48
PdfS4R2K0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
PdfS4R2K0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
PdfS4R2K0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
PdfS4R2K0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PdfS4R2K0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.05□□□□□ -0.48
PdfS4R2K0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
PdfS4R2K0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
PdfS4R2K0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
PdfS4R2K0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
PdfS4R2K0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.05□□□□□ -0.48
PdfS4R2K0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.05□□□□□ -0.48
PdfS4R2K0 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.05□□□□□ -0.48
PdfS4R2K0 Gm27000-201ENSMUST00000182943 842 ntBASIC12.05□□□□□ -0.48
PdfS4R2K0 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.05□□□□□ -0.48
PdfS4R2K0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.05□□□□□ -0.48
PdfS4R2K0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.05□□□□□ -0.48
PdfS4R2K0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
PdfS4R2K0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
PdfS4R2K0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PdfS4R2K0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.04□□□□□ -0.48
PdfS4R2K0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms