Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 App-207ENSMUST00000227737 2827 ntBASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Gm9013-201ENSMUST00000132939 882 ntBASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb3S4R1G7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Mir770-201ENSMUST00000103252 94 ntBASIC14.14□□□□□ -0.15
H2afb3S4R1G7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
H2afb3S4R1G7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.13□□□□□ -0.15
H2afb3S4R1G7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms