Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn9Q9Z0S7 Asic1-205ENSMUST00000228185 1818 ntBASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Gm9172-201ENSMUST00000212092 954 ntBASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn9Q9Z0S7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm8825-201ENSMUST00000182565 998 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm4518-201ENSMUST00000182638 718 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cldn9Q9Z0S7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms