Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Mir3113-201ENSMUST00000175478 76 ntBASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcb1Q9Z0H3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smarcb1Q9Z0H3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smarcb1Q9Z0H3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Smarcb1Q9Z0H3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms