Protein–RNA interactions for Protein: Q9Z0E3

Aire, Autoimmune regulator, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AireQ9Z0E3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AireQ9Z0E3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AireQ9Z0E3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AireQ9Z0E3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
AireQ9Z0E3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AireQ9Z0E3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
AireQ9Z0E3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AireQ9Z0E3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AireQ9Z0E3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AireQ9Z0E3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
AireQ9Z0E3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AireQ9Z0E3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.11□□□□□ -0.15
AireQ9Z0E3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
AireQ9Z0E3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
AireQ9Z0E3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
AireQ9Z0E3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AireQ9Z0E3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.11□□□□□ -0.15
AireQ9Z0E3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.1□□□□□ -0.15
AireQ9Z0E3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AireQ9Z0E3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Gm27742-201ENSMUST00000184667 60 ntBASIC14.09□□□□□ -0.15
AireQ9Z0E3 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.09□□□□□ -0.15
AireQ9Z0E3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AireQ9Z0E3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AireQ9Z0E3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AireQ9Z0E3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
AireQ9Z0E3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
AireQ9Z0E3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AireQ9Z0E3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AireQ9Z0E3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.08□□□□□ -0.16
AireQ9Z0E3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
AireQ9Z0E3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AireQ9Z0E3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AireQ9Z0E3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
AireQ9Z0E3 Mir3081-201ENSMUST00000175305 84 ntBASIC14.08□□□□□ -0.16
AireQ9Z0E3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.08□□□□□ -0.16
AireQ9Z0E3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.08□□□□□ -0.16
AireQ9Z0E3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AireQ9Z0E3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AireQ9Z0E3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
AireQ9Z0E3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AireQ9Z0E3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AireQ9Z0E3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
AireQ9Z0E3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms