Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col13a1Q9R1N9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.33□□□□□ -0.27
Col13a1Q9R1N9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col13a1Q9R1N9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col13a1Q9R1N9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col13a1Q9R1N9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Col13a1Q9R1N9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col13a1Q9R1N9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col13a1Q9R1N9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col13a1Q9R1N9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms