Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.71■□□□□ 0.1
Shroom3Q9QXN0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shroom3Q9QXN0 Gm12260-201ENSMUST00000122447 411 ntBASIC15.71■□□□□ 0.1
Shroom3Q9QXN0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.71■□□□□ 0.1
Shroom3Q9QXN0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.71■□□□□ 0.1
Shroom3Q9QXN0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.71■□□□□ 0.1
Shroom3Q9QXN0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
Shroom3Q9QXN0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shroom3Q9QXN0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shroom3Q9QXN0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Shroom3Q9QXN0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Gm8000-201ENSMUST00000188378 592 ntBASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.7■□□□□ 0.1
Shroom3Q9QXN0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom3Q9QXN0 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Gm43575-201ENSMUST00000196420 516 ntBASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom3Q9QXN0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Gm8097-201ENSMUST00000117903 829 ntBASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Gm15173-201ENSMUST00000122049 433 ntBASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Gm6550-201ENSMUST00000187574 993 ntBASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms