Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm19164-201ENSMUST00000210667 640 ntBASIC16.88■□□□□ 0.29
Cpsf3Q9QXK7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf3Q9QXK7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.88■□□□□ 0.29
Cpsf3Q9QXK7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.88■□□□□ 0.29
Cpsf3Q9QXK7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf3Q9QXK7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf3Q9QXK7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf3Q9QXK7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf3Q9QXK7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.88■□□□□ 0.29
Cpsf3Q9QXK7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf3Q9QXK7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf3Q9QXK7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Gm15358-201ENSMUST00000119249 520 ntBASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Gm18733-201ENSMUST00000173950 856 ntBASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Gm6550-201ENSMUST00000187574 993 ntBASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf3Q9QXK7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.86■□□□□ 0.29
Cpsf3Q9QXK7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Gm12350-201ENSMUST00000121208 462 ntBASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf3Q9QXK7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Gm7222-201ENSMUST00000117512 906 ntBASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Mir5126-201ENSMUST00000175513 77 ntBASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Gm44771-201ENSMUST00000206975 626 ntBASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf3Q9QXK7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms