Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm22065-201ENSMUST00000103753 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm22066-201ENSMUST00000103761 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm24932-201ENSMUST00000103763 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm24115-201ENSMUST00000103799 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm22190-201ENSMUST00000103827 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm22191-201ENSMUST00000103831 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm24721-201ENSMUST00000103849 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm28018-201ENSMUST00000103869 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm26399-201ENSMUST00000103937 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm25349-201ENSMUST00000177728 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm23616-201ENSMUST00000177797 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm25871-201ENSMUST00000177816 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm24752-201ENSMUST00000178240 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm24496-201ENSMUST00000178287 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm25649-201ENSMUST00000178476 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm25548-201ENSMUST00000178681 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm23147-201ENSMUST00000178841 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm26095-201ENSMUST00000179270 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm22171-201ENSMUST00000179283 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm23936-201ENSMUST00000179354 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm22619-201ENSMUST00000179516 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm25255-201ENSMUST00000179579 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm24755-201ENSMUST00000179691 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm26506-201ENSMUST00000179692 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm25086-201ENSMUST00000179931 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm23243-201ENSMUST00000180047 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm24659-201ENSMUST00000180212 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm24169-201ENSMUST00000180244 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm23689-201ENSMUST00000180354 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm27359-201ENSMUST00000184153 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm27785-201ENSMUST00000184268 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm27466-201ENSMUST00000184396 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm27703-201ENSMUST00000184836 110 ntBASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Gm14722-201ENSMUST00000118943 689 ntBASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Gm10499-201ENSMUST00000174094 934 ntBASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn5aQ9JJV9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms