Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl28Q9JIL2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Mir770-201ENSMUST00000103252 94 ntBASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Gm10013-201ENSMUST00000106074 672 ntBASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl28Q9JIL2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl28Q9JIL2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl28Q9JIL2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl28Q9JIL2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl28Q9JIL2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl28Q9JIL2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ccl28Q9JIL2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.71□□□□□ -0.38
Ccl28Q9JIL2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl28Q9JIL2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Ccl28Q9JIL2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl28Q9JIL2 Gm10231-201ENSMUST00000181584 441 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms