Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Gm7153-201ENSMUST00000117092 455 ntBASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Gm9172-201ENSMUST00000212092 954 ntBASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps35Q9EQH3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Gm25745-201ENSMUST00000174945 133 ntBASIC15.71■□□□□ 0.11
Vps35Q9EQH3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps35Q9EQH3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Vps35Q9EQH3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps35Q9EQH3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps35Q9EQH3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Gm24589-201ENSMUST00000116692 94 ntBASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.7■□□□□ 0.1
Vps35Q9EQH3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps35Q9EQH3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps35Q9EQH3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms