Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18■□□□□ 0.47
Col4a3bpQ9EQG9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18■□□□□ 0.47
Col4a3bpQ9EQG9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a3bpQ9EQG9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a3bpQ9EQG9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a3bpQ9EQG9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Col4a3bpQ9EQG9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a3bpQ9EQG9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a3bpQ9EQG9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a3bpQ9EQG9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 BC037039-201ENSMUST00000192003 2205 ntBASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a3bpQ9EQG9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col4a3bpQ9EQG9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col4a3bpQ9EQG9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a3bpQ9EQG9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Col4a3bpQ9EQG9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a3bpQ9EQG9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms