Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp4bQ9D8B3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp4bQ9D8B3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Gm12497-201ENSMUST00000138778 237 ntBASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4bQ9D8B3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Gm25745-201ENSMUST00000174945 133 ntBASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4bQ9D8B3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.74■□□□□ 0.75
Chmp4bQ9D8B3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Gm17807-201ENSMUST00000186869 298 ntBASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4bQ9D8B3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Gm12895-201ENSMUST00000122214 226 ntBASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4bQ9D8B3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4bQ9D8B3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms