Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d4aQ9D7V1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Gm27011-201ENSMUST00000182352 972 ntBASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Gm37055-201ENSMUST00000191866 133 ntBASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d4aQ9D7V1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Gm26039-201ENSMUST00000158152 144 ntBASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d4aQ9D7V1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Gm13559-201ENSMUST00000120476 863 ntBASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d4aQ9D7V1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms