Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4cQ9D7F7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4cQ9D7F7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4cQ9D7F7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Gm44430-201ENSMUST00000203376 995 ntBASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4cQ9D7F7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Grk6-207ENSMUST00000225925 2769 ntBASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4cQ9D7F7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms