Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Gm12896-201ENSMUST00000118430 226 ntBASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Gm18958-201ENSMUST00000174258 762 ntBASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Gm37292-201ENSMUST00000192062 758 ntBASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Il3ra-202ENSMUST00000223589 738 ntBASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps33aQ9D2N9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps33aQ9D2N9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps33aQ9D2N9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Gm13158-201ENSMUST00000122007 736 ntBASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps33aQ9D2N9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms