Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hdhd3Q9CYW4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Gm11539-201ENSMUST00000119837 557 ntBASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hdhd3Q9CYW4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hdhd3Q9CYW4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Gm3375-201ENSMUST00000203929 796 ntBASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hdhd3Q9CYW4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hdhd3Q9CYW4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms