Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Gm25925-201ENSMUST00000158314 306 ntBASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Gm42670-201ENSMUST00000201816 1292 ntBASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Gm7787-201ENSMUST00000216858 688 ntBASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Gm18622-201ENSMUST00000219361 595 ntBASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sec61bQ9CQS8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Mir8117-201ENSMUST00000184773 107 ntBASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 AC154634.3-201ENSMUST00000224589 736 ntBASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Gm42939-201ENSMUST00000197514 2205 ntBASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sec61bQ9CQS8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC8.42□□□□□ -1.06
Sec61bQ9CQS8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms