Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Gm42569-201ENSMUST00000200539 472 ntBASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTRAFQ9CQE8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Gm9731-201ENSMUST00000209480 747 ntBASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTRAFQ9CQE8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTRAFQ9CQE8 Gm12896-201ENSMUST00000118430 226 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms