Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Gm3375-201ENSMUST00000203929 796 ntBASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TpbpbQ9CQC0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TpbpbQ9CQC0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TpbpbQ9CQC0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TpbpbQ9CQC0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TpbpbQ9CQC0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms