Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.62■□□□□ 0.41
Pcdh15Q99PJ1 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdh15Q99PJ1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.62■□□□□ 0.41
Pcdh15Q99PJ1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdh15Q99PJ1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.62■□□□□ 0.41
Pcdh15Q99PJ1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh15Q99PJ1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh15Q99PJ1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh15Q99PJ1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh15Q99PJ1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh15Q99PJ1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh15Q99PJ1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdh15Q99PJ1 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh15Q99PJ1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Mir7085-201ENSMUST00000184353 66 ntBASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Gm13216-201ENSMUST00000117145 591 ntBASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Pcdh15Q99PJ1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Gm42612-201ENSMUST00000197986 623 ntBASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Gm43170-201ENSMUST00000199827 612 ntBASIC17.59■□□□□ 0.41
Pcdh15Q99PJ1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh15Q99PJ1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh15Q99PJ1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh15Q99PJ1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh15Q99PJ1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh15Q99PJ1 Gm14042-201ENSMUST00000120139 833 ntBASIC17.58■□□□□ 0.4
Pcdh15Q99PJ1 Gm27838-201ENSMUST00000184829 128 ntBASIC17.58■□□□□ 0.4
Pcdh15Q99PJ1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh15Q99PJ1 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.58■□□□□ 0.4
Pcdh15Q99PJ1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh15Q99PJ1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh15Q99PJ1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh15Q99PJ1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh15Q99PJ1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdh15Q99PJ1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh15Q99PJ1 Asic1-205ENSMUST00000228185 1818 ntBASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Gm24543-201ENSMUST00000103867 82 ntBASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh15Q99PJ1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms