Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh4Q99MT2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh4Q99MT2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh4Q99MT2 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.32■□□□□ 0.04
Msh4Q99MT2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh4Q99MT2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh4Q99MT2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh4Q99MT2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.31■□□□□ 0.04
Msh4Q99MT2 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.31■□□□□ 0.04
Msh4Q99MT2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.31■□□□□ 0.04
Msh4Q99MT2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Msh4Q99MT2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Gm34391-201ENSMUST00000203706 907 ntBASIC15.3■□□□□ 0.04
Msh4Q99MT2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 App-207ENSMUST00000227737 2827 ntBASIC15.3■□□□□ 0.04
Msh4Q99MT2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh4Q99MT2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Msh4Q99MT2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Gm15372-201ENSMUST00000120729 834 ntBASIC15.29■□□□□ 0.04
Msh4Q99MT2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Gm36967-201ENSMUST00000193814 266 ntBASIC15.29■□□□□ 0.04
Msh4Q99MT2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh4Q99MT2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh4Q99MT2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh4Q99MT2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Msh4Q99MT2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh4Q99MT2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms