Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf111Q99ML9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf111Q99ML9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rnf111Q99ML9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf111Q99ML9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf111Q99ML9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.27■□□□□ 0.03
Rnf111Q99ML9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Rnf111Q99ML9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf111Q99ML9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf111Q99ML9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf111Q99ML9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Gm29518-201ENSMUST00000190858 372 ntBASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf111Q99ML9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.25■□□□□ 0.03
Rnf111Q99ML9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Gm10052-201ENSMUST00000168019 960 ntBASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Gm7729-201ENSMUST00000050143 801 ntBASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rnf111Q99ML9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms