Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkd1Q99MH6 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkd1Q99MH6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkd1Q99MH6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nkd1Q99MH6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Mir6982-201ENSMUST00000184354 68 ntBASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Gm44430-201ENSMUST00000203376 995 ntBASIC14.83□□□□□ -0.04
Nkd1Q99MH6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkd1Q99MH6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms